Data on immune priming effects (IPEs) of sea spray aerosol (SSA) samples collected from the field and generated using a laboratory-based SSA generator
Citeerbaar als data publicatie
Li, Y.; Schütte, W.; Van Beeck, W.; Dekeukeleire, M.; Janssen, C.; Boon, N.; Asselman, J.; Lebeer, S.; Spacova, I.; De Rijcke, M.; Flanders Marine Institute (VLIZ); University of Antwerp; Ghent University: Belgium; (2025): Data on immune priming effects (IPEs) of sea spray aerosol (SSA) samples collected from the field and generated using a laboratory-based SSA generator. Marine Data Archive. https://doi.org/10.14284/747
Contact:
Li, Yunmeng Beschikbaarheid: Dit werk valt onder volgende licentie http://vocab.nerc.ac.uk/collection/L08/current/MO hierdoor valt het onder embargo tot 2025-11-07
Nota: Sequencing data (Fast5 and Fastq) are available through the Marine Data Archive (MDA). Please contact data@vliz.be.
Beschrijving
This dataset includes immune priming effects (IPEs) of sea spray aerosol (SSA) samples collected from the field (n = 13) and generated using a laboratory-based SSA generator (n = 13). IPEs were assessed using human reporter cell assays by measuring the activation of TLR4, NF-κB, and IRF. SSA samples were grouped by collection site and week (resulting in six pooled samples) for bacterial community profiling using nanopore full-length 16S rRNA gene sequencing. The resulting bacterial abundance data were then analyzed in relation to the measured IPEs on TLR4 to identify taxa potentially associated with immunomodulatory responses. Scope Thema's: Biologie > Ecologie - biodiversiteit, Kustonderzoek (bv. stranden, estuaria), Milieu-kwaliteit / vervuiling Kernwoorden: , 16S rRNA gene sequencing, Endotoxin, Marine/Coastal, ANE, België, Haven van Oostende, Bacteria Geografische spreiding ANE, België, Haven van Oostende [Marine Regions] Spreiding in de tijd
18 Juni 2023 Taxonomic coverage
Bacteria [WoRMS]
TLR4 activation : HEK-Blue hTLR4 cells Bacterial community: Nanopore full-length 16S rRNA gene sequencing Bijdrage door
Vlaams Instituut voor de Zee (VLIZ), meer, data creator
University of Antwerp; Department of Bioscience Engineering; Laboratory of Applied Microbiology and Biotechnology (ENdEMIC), meer, data creator
Ghent University; Blue Growth Research Lab, meer, data creator
Universiteit Gent; Faculteit Bio-ingenieurswetenschappen; Vakgroep Biotechnologie; Centrum voor Microbiële Ecologie en Technologie (CMET), meer, data creator
Project
PhD Marine bacteria and bacterial endotoxin in sea spray aerosols and potential health effects, meer
Financiering AVI
Dataset status: Afgelopen
Data type: Data
Data oorsprong: Onderzoek: labo-experiment
Metadatarecord aangemaakt: 2025-05-08
Informatie laatst gewijzigd: 2025-05-08
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